Skip to content

Optimization ideas for mxpedigree #159

Description

@smasongarrison
  • Consolidate/reuse relatedness matrices when they are the same for multiple families. right now each group gets its own copy which is hugely expensive.
  • reduce how much information is storred for the temporal matrices. Do we really need each of the following?
Object Retain? Reason
Eta_k Usually no Reconstructible linear predictor
L_k Yes Small and directly interpretable
K_k Usually no Reconstructible from L_k
V_k Yes Actual component covariance
V Yes Required by expectation

Metadata

Metadata

Labels

No labels
No labels

Type

No type

Projects

No projects

Milestone

No milestone

Relationships

None yet

Development

No branches or pull requests

Issue actions