From 485965571806cbaed4bd9f65892885364e9f8427 Mon Sep 17 00:00:00 2001 From: mite-bot Date: Tue, 14 Jul 2026 11:46:55 +0200 Subject: [PATCH 1/4] Add submission UUID file --- .../d9b340de-7f68-11f1-9115-dd113f401ed3.json | 44 +++++++++++++++++++ 1 file changed, 44 insertions(+) create mode 100644 mite_data/data/d9b340de-7f68-11f1-9115-dd113f401ed3.json diff --git a/mite_data/data/d9b340de-7f68-11f1-9115-dd113f401ed3.json b/mite_data/data/d9b340de-7f68-11f1-9115-dd113f401ed3.json new file mode 100644 index 00000000..fe55735f --- /dev/null +++ b/mite_data/data/d9b340de-7f68-11f1-9115-dd113f401ed3.json @@ -0,0 +1,44 @@ +{ + "accession": "MITE9999999", + "status": "pending", + "changelog": [ + { + "version": "1", + "date": "2026-07-14", + "contributors": [ + "0000-0003-3002-6458" + ], + "reviewers": [ + "BBBBBBBBBBBBBBBBBBBBBBBB" + ], + "comment": "New entry." + } + ], + "enzyme": { + "name": "gfsF", + "databaseIds": { + "uniprot": "E0D207", + "genpept": "" + }, + "references": [ + "doi:" + ] + }, + "reactions": [ + { + "evidence": { + "evidenceCode": [], + "references": [ + "doi:" + ] + }, + "reactions": [ + { + "products": [ + "" + ] + } + ] + } + ] +} \ No newline at end of file From 8b76505a4c909e205ec5090502fb04e52a8548b3 Mon Sep 17 00:00:00 2001 From: mite-bot Date: Tue, 14 Jul 2026 11:51:38 +0200 Subject: [PATCH 2/4] Update submission --- .../d9b340de-7f68-11f1-9115-dd113f401ed3.json | 49 ++++++++++++++----- 1 file changed, 36 insertions(+), 13 deletions(-) diff --git a/mite_data/data/d9b340de-7f68-11f1-9115-dd113f401ed3.json b/mite_data/data/d9b340de-7f68-11f1-9115-dd113f401ed3.json index fe55735f..9706fff7 100644 --- a/mite_data/data/d9b340de-7f68-11f1-9115-dd113f401ed3.json +++ b/mite_data/data/d9b340de-7f68-11f1-9115-dd113f401ed3.json @@ -1,6 +1,7 @@ { "accession": "MITE9999999", "status": "pending", + "comment": "epoxidation and hydroxylation of a macrolide in a stepwise manner", "changelog": [ { "version": "1", @@ -16,29 +17,51 @@ ], "enzyme": { "name": "gfsF", + "description": "Cytochrome P450", + "references": [ + "doi:10.1002/cbic.201000214" + ], "databaseIds": { "uniprot": "E0D207", - "genpept": "" + "genpept": "BAJ16472.1", + "mibig": "BGC0000058" }, - "references": [ - "doi:" - ] + "cofactors": { + "organic": [ + "Heme" + ], + "inorganic": [ + "Fe" + ] + } }, "reactions": [ { - "evidence": { - "evidenceCode": [], - "references": [ - "doi:" - ] - }, + "tailoring": [ + "Hydroxylation", + "Monooxygenation", + "Other" + ], + "description": "epoxidation and hydroxylation of a macrolide", + "reactionSMARTS": "[C:1]1=[C:10]-[C@@:11](/[O:32])-[C@:12](\\[C:35])-[C:13]=[C:14](-[C:34])-[C:15]=[C:16](-[C:33])-[C:17](-[O:28]\\[C@:7](-[C@@:8](\\[C:36])-[C:9]/[C:18]=[C:19]/[C:20]-[C@@:21](\\[O:31])-[C@@:22](\\[C:39])-[C@@:23](/[O:30])-[C@:24](/[C:38])-[C@@:25](/[O:29]-[C:37])-[C:26])-[C:6]-[C:5]=[C:4]-[C:3]-[C:2]-1)=[O:27]>>[C@:1]12[O][C@@:10]1[C@@:11](/[O:32])[C@:12](\\[C:35])[C:13]=[C:14](-[C:34])[C:15]=[C:16](-[C:33])[C:17](-[O:28]\\[C@:7](-[C@@:8](\\[C:36])-[C:9]/[C:18]=[C:19]/[C:20]-[C@@:21](\\[O:31])-[C@@:22](\\[C:39])-[C@@:23](/[O:30])-[C@:24](/[C:38])-[C@@:25](/[O:29]-[C:37])-[C:26])-[C:6]-[C:5]=[C:4]-[C:3]-[C@@:2]2[O])=[O:27]", "reactions": [ { + "substrate": "CO[C@@H](C)[C@@H](C)[C@H](O)[C@H](C)[C@@H](O)C/C=C/C[C@H](C)[C@@H]1C/C=C/CC/C=C/[C@@H](O)[C@H](C)/C=C(C)\\C=C(\\C)C(=O)O1", "products": [ - "" - ] + "CO[C@@H](C)[C@@H](C)[C@H](O)[C@H](C)[C@@H](O)C/C=C/C[C@H](C)[C@@H]1CC=CC[C@@H](O)[C@@H]2O[C@H]2[C@@H](O)[C@H](C)C=C(C)C=C(C)C(=O)O1" + ], + "isIntermediate": true } - ] + ], + "evidence": { + "evidenceCode": [ + "In vitro assay", + "Knock-out studies" + ], + "references": [ + "doi:10.1002/cbic.201000214" + ] + } } ] } \ No newline at end of file From 02e955aeb0b59cc944b84c4850e65d810ae17172 Mon Sep 17 00:00:00 2001 From: mite-bot Date: Tue, 21 Jul 2026 09:18:20 +0200 Subject: [PATCH 3/4] Delete mite_data/data/d9b340de-7f68-11f1-9115-dd113f401ed3.json --- .../d9b340de-7f68-11f1-9115-dd113f401ed3.json | 67 ------------------- 1 file changed, 67 deletions(-) delete mode 100644 mite_data/data/d9b340de-7f68-11f1-9115-dd113f401ed3.json diff --git a/mite_data/data/d9b340de-7f68-11f1-9115-dd113f401ed3.json b/mite_data/data/d9b340de-7f68-11f1-9115-dd113f401ed3.json deleted file mode 100644 index 9706fff7..00000000 --- a/mite_data/data/d9b340de-7f68-11f1-9115-dd113f401ed3.json +++ /dev/null @@ -1,67 +0,0 @@ -{ - "accession": "MITE9999999", - "status": "pending", - "comment": "epoxidation and hydroxylation of a macrolide in a stepwise manner", - "changelog": [ - { - "version": "1", - "date": "2026-07-14", - "contributors": [ - "0000-0003-3002-6458" - ], - "reviewers": [ - "BBBBBBBBBBBBBBBBBBBBBBBB" - ], - "comment": "New entry." - } - ], - "enzyme": { - "name": "gfsF", - "description": "Cytochrome P450", - "references": [ - "doi:10.1002/cbic.201000214" - ], - "databaseIds": { - "uniprot": "E0D207", - "genpept": "BAJ16472.1", - "mibig": "BGC0000058" - }, - "cofactors": { - "organic": [ - "Heme" - ], - "inorganic": [ - "Fe" - ] - } - }, - "reactions": [ - { - "tailoring": [ - "Hydroxylation", - "Monooxygenation", - "Other" - ], - "description": "epoxidation and hydroxylation of a macrolide", - "reactionSMARTS": "[C:1]1=[C:10]-[C@@:11](/[O:32])-[C@:12](\\[C:35])-[C:13]=[C:14](-[C:34])-[C:15]=[C:16](-[C:33])-[C:17](-[O:28]\\[C@:7](-[C@@:8](\\[C:36])-[C:9]/[C:18]=[C:19]/[C:20]-[C@@:21](\\[O:31])-[C@@:22](\\[C:39])-[C@@:23](/[O:30])-[C@:24](/[C:38])-[C@@:25](/[O:29]-[C:37])-[C:26])-[C:6]-[C:5]=[C:4]-[C:3]-[C:2]-1)=[O:27]>>[C@:1]12[O][C@@:10]1[C@@:11](/[O:32])[C@:12](\\[C:35])[C:13]=[C:14](-[C:34])[C:15]=[C:16](-[C:33])[C:17](-[O:28]\\[C@:7](-[C@@:8](\\[C:36])-[C:9]/[C:18]=[C:19]/[C:20]-[C@@:21](\\[O:31])-[C@@:22](\\[C:39])-[C@@:23](/[O:30])-[C@:24](/[C:38])-[C@@:25](/[O:29]-[C:37])-[C:26])-[C:6]-[C:5]=[C:4]-[C:3]-[C@@:2]2[O])=[O:27]", - 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