From 8ecf2d11982e7ff2563534246ae19a088e445868 Mon Sep 17 00:00:00 2001 From: mite-bot Date: Tue, 14 Jul 2026 14:11:15 +0200 Subject: [PATCH 1/2] Add submission UUID file --- .../06340ca6-7f7d-11f1-9115-dd113f401ed3.json | 44 +++++++++++++++++++ 1 file changed, 44 insertions(+) create mode 100644 mite_data/data/06340ca6-7f7d-11f1-9115-dd113f401ed3.json diff --git a/mite_data/data/06340ca6-7f7d-11f1-9115-dd113f401ed3.json b/mite_data/data/06340ca6-7f7d-11f1-9115-dd113f401ed3.json new file mode 100644 index 00000000..a0c77a85 --- /dev/null +++ b/mite_data/data/06340ca6-7f7d-11f1-9115-dd113f401ed3.json @@ -0,0 +1,44 @@ +{ + "accession": "MITE9999999", + "status": "pending", + "changelog": [ + { + "version": "1", + "date": "2026-07-14", + "contributors": [ + "0009-0000-8651-1669" + ], + "reviewers": [ + "BBBBBBBBBBBBBBBBBBBBBBBB" + ], + "comment": "New entry." + } + ], + "enzyme": { + "name": "CmlS", + "databaseIds": { + "uniprot": "F2RB87", + "genpept": "" + }, + "references": [ + "doi:" + ] + }, + "reactions": [ + { + "evidence": { + "evidenceCode": [], + "references": [ + "doi:" + ] + }, + "reactions": [ + { + "products": [ + "" + ] + } + ] + } + ] +} \ No newline at end of file From 00dd39c81a96be96da24ed71e98c2f091d23488f Mon Sep 17 00:00:00 2001 From: mite-bot Date: Tue, 14 Jul 2026 15:09:39 +0200 Subject: [PATCH 2/2] Update submission --- .../06340ca6-7f7d-11f1-9115-dd113f401ed3.json | 57 ++++++++++++++----- 1 file changed, 44 insertions(+), 13 deletions(-) diff --git a/mite_data/data/06340ca6-7f7d-11f1-9115-dd113f401ed3.json b/mite_data/data/06340ca6-7f7d-11f1-9115-dd113f401ed3.json index a0c77a85..be798eda 100644 --- a/mite_data/data/06340ca6-7f7d-11f1-9115-dd113f401ed3.json +++ b/mite_data/data/06340ca6-7f7d-11f1-9115-dd113f401ed3.json @@ -1,6 +1,7 @@ { "accession": "MITE9999999", "status": "pending", + "comment": "Dichlorination of CoA-S-acetoacetyl in the chloramphenicol pathway. No specific flavin reductase was identified in this genecluster. Additional GenPept: AAK08979.2", "changelog": [ { "version": "1", @@ -16,29 +17,59 @@ ], "enzyme": { "name": "CmlS", + "description": "Flavin-dependent halogenase", + "references": [ + "doi:10.1016/j.jmb.2010.01.020" + ], + "auxiliaryEnzymes": [ + { + "name": "CmlK", + "description": "Long-chain fatty acid CoA ligase", + "databaseIds": { + "uniprot": "F2RB86", + "genpept": "CCA54214.1" + } + } + ], "databaseIds": { "uniprot": "F2RB87", - "genpept": "" + "genpept": "CCA54215.1", + "mibig": "BGC0000893" }, - "references": [ - "doi:" - ] + "cofactors": { + "organic": [ + "Coenzyme A", + "FAD", + "NAD", + "NADP" + ] + } }, "reactions": [ { - "evidence": { - "evidenceCode": [], - "references": [ - "doi:" - ] - }, + "tailoring": [ + "Halogenation" + ], + "description": "Dichlorination of acetoacetyl-CoA, catalyzed through E44 residue, which removes structurally protons reducing the acidity in the pocket.", + "reactionSMARTS": "[#6]-[#6](-[#6:4]-[#6:5](-[#16:7]-[*])=[#8:6])=[#8]>>Cl-[#6:4](-[Cl])-[#6:5](-[#16:7]-[*])=[#8:6]", "reactions": [ { + "substrate": "*SC(=O)CC(C)=O", "products": [ - "" - ] + "*SC(=O)C(Cl)Cl" + ], + "isIntermediate": true } - ] + ], + "evidence": { + "evidenceCode": [ + "Knock-out studies" + ], + "references": [ + "doi:10.1016/j.jmb.2010.01.020", + "doi:10.1099/mic.0.26319-0" + ] + } } ] } \ No newline at end of file