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feat: repoint stale repo links to AustralianBioCommons/sbp-bindflow#1

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amandazhuyilan wants to merge 1 commit into
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SBP-453-migrate-workflow-repo
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feat: repoint stale repo links to AustralianBioCommons/sbp-bindflow#1
amandazhuyilan wants to merge 1 commit into
mainfrom
SBP-453-migrate-workflow-repo

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@amandazhuyilan

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PR checklist

  • This comment contains a description of changes (with reason).
  • If you've fixed a bug or added code that should be tested, add tests!
  • If you've added a new tool - have you followed the pipeline conventions in the contribution docs
  • Make sure your code lints (nf-core pipelines lint).
  • Ensure the test suite passes (nextflow run . -profile test,docker --outdir <OUTDIR>).
  • Check for unexpected warnings in debug mode (nextflow run . -profile debug,test,docker --outdir <OUTDIR>).
  • Usage Documentation in docs/usage.md is updated.
  • Output Documentation in docs/output.md is updated.
  • CHANGELOG.md is updated.
  • README.md is updated (including new tool citations and authors/contributors).

This repo is mirrored from bindflow. Update all references to the old repositories (Australian-Structural-Biology-Computing/bindflow and ziadbkh/bindflow) to point to the new repo here.

  • Nextflow manifest name/homePage (nextflow.config, modules.json)
  • JSON schema $id and title (nextflow_schema.json, assets/schema_input.json)
  • CI github.repository guards (ci.yml, branch.yml, fix-linting.yml)
  • Docs, README, CHANGELOG, CITATIONS
  • GitHub PR/issue/contributing templates
  • Email/MultiQC/methods asset templates, conf test configs, samplesheet URLs
  • .nf-core.yml org

@amandazhuyilan amandazhuyilan deleted the SBP-453-migrate-workflow-repo branch July 3, 2026 00:34
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