Hoffmann-Lab
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TEdetectionEvaluation
TEdetectionEvaluation PublicTool comparison for detecting differentially expressed individual transposable elements
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shournal
shournal PublicForked from tycho-kirchner/shournal
Log shell-commands and used files. Snapshot executed scripts. Fully automatic.
Repositories
- Enhancing_the_performance_and_interpretability_of_epigenetic_clocks Public Forked from Tusharpatel-lab/Enhancing_the_performance_and_interpretability_of_epigenetic_clocks
Source code for the "Enhancing the performance and interpretability of epigenetic clocks", and running TFMethyl DNAm clock.
- muvac Public
MUVAC implements multiple variant calling options from Exome-Seq/WG-Seq or RNA-Seq data. It offers free GATK best-practices in an optimized, parallelized fashion.
- rippchen Public
Peak calling from *IP-Seq or differential expression- and ontology analysis from RNA-Seq data
- shournal Public Forked from tycho-kirchner/shournal
Log shell-commands and used files. Snapshot executed scripts. Fully automatic.
- Principles_of_tissue-specific_regulation_of_transposable_elements_during_aging Public
Code for the Manuscript "Principles of tissue-specific regulation of transposable elements during aging".
- Gene_regulation_by_convergent_promoters Public
Code for the publication "Gene regulation by convergent promoters".
- STageR Public
STage of aging estimatoR: Cluster-based epigenetic clockwise classifier predicting the aging stage
- PhyloEpiGenomics Public
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