Xiaoxu Yang Laboratory
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Repositories
- FERTBase Public
FERTBase is an extensitvely collected, expert reviewed fertility genetic knowledgebase
XiaoxuYangLab/FERTBase’s past year of commit activity - Sperm_control_cohort_mosaicism Public
This repository collects pipelines, codes, and some intermediate results for the study of mosaic SNV/Indels for sperm, blood, and other samples of a control cohort.
XiaoxuYangLab/Sperm_control_cohort_mosaicism’s past year of commit activity - Human_Inhibitory_Neurons Public
This repository contains codes and pipelines, as well as data used in the analysis of human inhibitory and excitatory neuronal clonal dynamics and lineage relationships, with cell-type-specific mosaic variant barcoding analysis (cMVBA).
XiaoxuYangLab/Human_Inhibitory_Neurons’s past year of commit activity - DeepMosaic Public
DeepMosaic is a deep-learning-based mosaic single nucleotide classification tool without the need of matched control information.
XiaoxuYangLab/DeepMosaic’s past year of commit activity - PASM Public
Scripts for the calculation of variant allelic fractions for the validation and quantification of mosaic mutations. Scripts for PASM, TAS/TASeq, and MPAS. We provided perl+R versions, python versions, and an extended snakemake version with all additional annotations.
XiaoxuYangLab/PASM’s past year of commit activity - Human_DRG_SG Public
Understanding human neuronal development between dorsal root ganglia and sympathetic ganglia chains
XiaoxuYangLab/Human_DRG_SG’s past year of commit activity - .github Public
XiaoxuYangLab/.github’s past year of commit activity - MosaicBase Public
MosaicBase is a comprehensive knowledgebase for postzygotic mosaic variants from noncancer disease-related and healthy human individuals
XiaoxuYangLab/MosaicBase’s past year of commit activity
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