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Tychele_2020
Tychele_2020
 
 
islet_2020
islet_2020
 
 
notebooks
notebooks
 
 
.gitignore
.gitignore
 
 
README.md
README.md
 
 
bedpe2multires.sh
bedpe2multires.sh
 
 
calcAPA.R
calcAPA.R
 
 
calcAPA.sh
calcAPA.sh
 
 
calcAPA_dist_bins.sh
calcAPA_dist_bins.sh
 
 
callAPA.pbs
callAPA.pbs
 
 
callAPA.sh
callAPA.sh
 
 
callArrowHead.sh
callArrowHead.sh
 
 
dumpKR.sh
dumpKR.sh
 
 
genHic.pbs
genHic.pbs
 
 
genHicSimple.pbs
genHicSimple.pbs
 
 
genHicSimple.sh
genHicSimple.sh
 
 
juicer.sh
juicer.sh
 
 
permAPA.sh
permAPA.sh
 
 
runHic2cool.pbs
runHic2cool.pbs
 
 
runHiccups.pbs
runHiccups.pbs
 
 
runHiccups.sh
runHiccups.sh
 
 
runHiccups_online.sh
runHiccups_online.sh
 
 
runJuicer.pbs
runJuicer.pbs
 
 
runJuicer.sh
runJuicer.sh
 
 
runMega.pbs
runMega.pbs
 
 
runMega.sh
runMega.sh
 
 
runQth.pbs
runQth.pbs
 
 

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HiC processing scripts used in the center.

Topics

pipeline hic

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Readme
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