chore(deps): bump actions/upload-artifact from 4.6.2 to 7.0.1

[dependabot]

Bumps actions/upload-artifact from 4.6.2 to 7.0.1.

Release notes

Sourced from actions/upload-artifact's releases.

v7.0.1

What's Changed

• Update the readme with direct upload details by @​danwkennedy in actions/upload-artifact#795
• Readme: bump all the example versions to v7 by @​danwkennedy in actions/upload-artifact#796
• Include changes in typespec/ts-http-runtime 0.3.5 by @​yacaovsnc in actions/upload-artifact#797

Full Changelog: actions/upload-artifact@v7...v7.0.1

v7.0.0

v7 What's new

Direct Uploads

Adds support for uploading single files directly (unzipped). Callers can set the new archive parameter to false to skip zipping the file during upload. Right now, we only support single files. The action will fail if the glob passed resolves to multiple files. The name parameter is also ignored with this setting. Instead, the name of the artifact will be the name of the uploaded file.

ESM

To support new versions of the @actions/* packages, we've upgraded the package to ESM.

What's Changed

• Add proxy integration test by @​Link- in actions/upload-artifact#754
• Upgrade the module to ESM and bump dependencies by @​danwkennedy in actions/upload-artifact#762
• Support direct file uploads by @​danwkennedy in actions/upload-artifact#764

New Contributors

• @​Link- made their first contribution in actions/upload-artifact#754

Full Changelog: actions/upload-artifact@v6...v7.0.0

v6.0.0

v6 - What's new

[!IMPORTANT] actions/upload-artifact@v6 now runs on Node.js 24 (runs.using: node24) and requires a minimum Actions Runner version of 2.327.1. If you are using self-hosted runners, ensure they are updated before upgrading.

Node.js 24

This release updates the runtime to Node.js 24. v5 had preliminary support for Node.js 24, however this action was by default still running on Node.js 20. Now this action by default will run on Node.js 24.

What's Changed

• Upload Artifact Node 24 support by @​salmanmkc in actions/upload-artifact#719
• fix: update @​actions/artifact for Node.js 24 punycode deprecation by @​salmanmkc in actions/upload-artifact#744
• prepare release v6.0.0 for Node.js 24 support by @​salmanmkc in actions/upload-artifact#745

Full Changelog: actions/upload-artifact@v5.0.0...v6.0.0

v5.0.0

What's Changed

... (truncated)

Commits

• 043fb46 Merge pull request #797 from actions/yacaovsnc/update-dependency
• 634250c Include changes in typespec/ts-http-runtime 0.3.5
• e454baa Readme: bump all the example versions to v7 (#796)
• 74fad66 Update the readme with direct upload details (#795)
• bbbca2d Support direct file uploads (#764)
• 589182c Upgrade the module to ESM and bump dependencies (#762)
• 47309c9 Merge pull request #754 from actions/Link-/add-proxy-integration-tests
• 02a8460 Add proxy integration test
• b7c566a Merge pull request #745 from actions/upload-artifact-v6-release
• e516bc8 docs: correct description of Node.js 24 support in README
• Additional commits viewable in compare view

[github-actions]

Summary

Summary

Generated on:	07/17/2026 - 12:52:15
Parser:	Cobertura
Assemblies:	5
Classes:	32
Files:	32
Line coverage:	86.4% (2182 of 2524)
Covered lines:	2182
Uncovered lines:	342
Coverable lines:	2524
Total lines:	8079
Covered branches:	0
Total branches:	0
Method coverage:	Feature is only available for sponsors

Coverage

src.bioemu - 89%

Name	Line	Branch
src.bioemu	89%	****
init.py	100%
chemgraph.py	100%
convert_chemgraph.py	97%
denoiser.py	98.3%
get_embeds.py	92.1%
md_utils.py	85.8%
model_utils.py	78%
models.py	94.1%
run_hpacker.py	0%
sample.py	92.2%
sde_lib.py	88.3%
seq_io.py	100%
shortcuts.py	100%
sidechain_relax.py	75%
so3_sde.py	90.3%
structure_module.py	84.3%
utils.py	65.6%

src.bioemu.colabfold_inline - 79.1%

Name	Line	Branch
src.bioemu.colabfold_inline	79.1%	****
init.py
features.py	100%
input_parsing.py	100%
model_runner.py	99%
msa_client.py	60.8%

src.bioemu.hpacker_setup - 69.2%

Name	Line	Branch
src.bioemu.hpacker_setup	69.2%	****
init.py
setup_hpacker.py	69.2%

src.bioemu.steering - 79.5%

Name	Line	Branch
src.bioemu.steering	79.5%	****
init.py	100%
collective_variables.py	34.8%
dpm_fkc.py	100%
dpm_smc.py	100%
potentials.py	95.3%
utils.py	83.5%

src.bioemu.training - 100%

Name	Line	Branch
src.bioemu.training	100%	****
foldedness.py	100%
loss.py	100%

[github-actions]

Summary

Summary

Generated on:	07/20/2026 - 08:59:54
Parser:	Cobertura
Assemblies:	5
Classes:	32
Files:	32
Line coverage:	86.4% (2182 of 2524)
Covered lines:	2182
Uncovered lines:	342
Coverable lines:	2524
Total lines:	8079
Covered branches:	0
Total branches:	0
Method coverage:	Feature is only available for sponsors

Coverage

src.bioemu - 89%

Name	Line	Branch
src.bioemu	89%	****
init.py	100%
chemgraph.py	100%
convert_chemgraph.py	97%
denoiser.py	98.3%
get_embeds.py	92.1%
md_utils.py	85.8%
model_utils.py	78%
models.py	94.1%
run_hpacker.py	0%
sample.py	92.2%
sde_lib.py	88.3%
seq_io.py	100%
shortcuts.py	100%
sidechain_relax.py	75%
so3_sde.py	90.3%
structure_module.py	84.3%
utils.py	65.6%

src.bioemu.colabfold_inline - 79.1%

Name	Line	Branch
src.bioemu.colabfold_inline	79.1%	****
init.py
features.py	100%
input_parsing.py	100%
model_runner.py	99%
msa_client.py	60.8%

src.bioemu.hpacker_setup - 69.2%

Name	Line	Branch
src.bioemu.hpacker_setup	69.2%	****
init.py
setup_hpacker.py	69.2%

src.bioemu.steering - 79.5%

Name	Line	Branch
src.bioemu.steering	79.5%	****
init.py	100%
collective_variables.py	34.8%
dpm_fkc.py	100%
dpm_smc.py	100%
potentials.py	95.3%
utils.py	83.5%

src.bioemu.training - 100%

Name	Line	Branch
src.bioemu.training	100%	****
foldedness.py	100%
loss.py	100%