Skip to content
#

brca1

Star

Here are 3 public repositories matching this topic...

Language: All
Filter by language
All 3 HTML 1 R 1

ghoshparnabali / Identification-of-Somatic-Variants-in-Breast-Cancer-Whole-Exome-Sequencing-WES-Data

Star 0

This repository contains an end-to-end tumour-only somatic variant-calling pipeline (GATK Mutect2 + snpEff) for triple-negative breast cancer whole-exome data, focused on BRCA1/BRCA2/TP53, built on Visual Studio Code via Google Colab.

bioinformatics ngs visual-studio-code cancer-genomics multiqc variant-calling somatic-mutations wes bwa-mem whole-exome-sequencing breast-cancer snpeff mutect2 fastqc google-colab gatk4 sra-toolkit tp53 brca2 brca1
  • Updated Jul 1, 2026
  • HTML

Improve this page

Add a description, image, and links to the brca1 topic page so that developers can more easily learn about it.

Curate this topic

Add this topic to your repo

To associate your repository with the brca1 topic, visit your repo's landing page and select "manage topics."

Learn more