tp53
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This repository contains an end-to-end tumour-only somatic variant-calling pipeline (GATK Mutect2 + snpEff) for triple-negative breast cancer whole-exome data, focused on BRCA1/BRCA2/TP53, built on Visual Studio Code via Google Colab.
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Jul 1, 2026 - HTML
Find tumor gene mutation rates (TP53 and STAT5A) using cancer datasets from The Cancer Genome Atlas.
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Apr 9, 2025
Bioinformatics pipeline for TP53 tumor suppressor gene — DNA to mRNA, BLAST, AlphaFold2 structure prediction, and GNINA ligand docking.
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Jun 2, 2026 - Python
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